Susceptibility to antimicrobial preparations of Klebsiella pneumoniae strains isolated from patients in a multidisciplinary hospital

Cover Page

Cite item

Full Text

Abstract

Introduction. The extraordinary genetic potential of microorganisms has benefited from human overuse antibiotics to develop multiple resistance mechanisms. The large size and heterogeneity of the Russian population, the presence of territories with significant differences in demographic, cultural, and socio-economic indicators, the features of the management and availability of medical care are significant factors influencing the spread of resistance genes to antibacterial therapy of some strains of microorganisms.

Materials and methods. Susceptibility to twenty one antimicrobial agents of one hundred twenty eight Klebsiella pneumoniae isolates, isolated from various loci of patients in a multidisciplinary hospital, including 16% of strains from the lower respiratory tract, 44% from wounds and wound discharge, and 40% from urine, was assessed.

Results. Among isolates from urine, 20% of isolates were found to have the multidrug resistance (MDR) phenotype, 42% had the extreme resistance phenotype (XDR). Among the isolates of Kl. pneumoniae from purulent wounds, 18% had the MDR phenotype, and 43% had the XDR phenotype. Among the isolates of Kl. Рneumoniae from the lower respiratory tract, 37% had the MDR phenotype, 40% had the XDR phenotype. There are no pan-resistant strains in all groups.

The presence of genes for metallo-beta-lactamase (VIM, IMP, NDM groups) and serine carbapenemase (bovine and OXA-48) in molecular genetic study by real-time PCR of isolated Kl. pneumoniae was found in 73.4% of cases.

The results of determining the sensitivity of the isolates revealed a low activity of amoxicillin / clavulanic acid, III and IV generation cephalosporins (ceftazidime, cefotaxime, cefepime). 86.7% of isolates are resistant to drugs of the aminoglycoside group (amikacin), and 100% to gentamicin. Of the group of carbapenems, meropenem showed the highest activity — 26.6%, about 7% were sensitive to ertapenem. From the group of fluoroquinolones, sensitivity ranged from 20 to 30%. The highest activity of all drugs was shown by ticarcillin/clavulanate — 33.3%.

Limitations. The criteria for inclusion in the group of examination and selection of biomaterial were the presence of previous massive antibacterial therapy in the anamnesis, the presence of catheters, drains, etc.

Conclusions. There was established a high proportion of strains Kl. pneumoniae with the phenotype of multiple antibiotic resistance.

Compliance with ethical standards. The examination of patients corresponded to the ethical standards of the Bioethical Committee of the Ufa Research Institute of Occupational Medicine and Human Ecology, developed in accordance with the Helsinki Declaration of the World Association “Ethical Principles of Practice in the Russian Federation”, approved by Order No. 266 of the Ministry of Health of the Russian Federation dated 06/19/2003. All the examined persons signed an informed consent to participate in the survey. Conclusion of the Bioethical Commission of the Ufa Research Institute of Occupational Medicine and Human Ecology (BEC protocol from 03.04.2023 No. 01-04).

Contribution:
Gizatullina L.G. — research concept and design, research execution, text writing;
Bakirov A.B. — concept and design of the study;
Masyagutova L.M. — writing the text;
Kudakaeva R.H. — writing the text;
Muzafarova A.R. — selection of literature, writing of the text.
All authors are responsible for the integrity of all parts of the manuscript and approval of the manuscript final version.

Conflict of interest. The authors declare no conflict of interest.

Acknowledgement. The study had no sponsorship.

Received: May 19, 2023 / Accepted: September 26, 2023 / Published: October 30, 2023

About the authors

Lilia G. Gizatullina

Ufa Scientific Research Institute of Occupational Medicine and Human Ecology

Author for correspondence.
Email: Instityt.Ufa@mail.ru
ORCID iD: 0000-0001-7900-233X

Biologist of the Immuno-Bacteriological Institute of the Ufa Scientific Research Institute of Occupational Medicine and Human Ecology, Ufa, 450106, Russian Federation.

e-mail: Instityt.Ufa@mail.ru

 

Russian Federation

Ahat B. Bakirov

Ufa Scientific Research Institute of Occupational Medicine and Human Ecology; Bashkir State Medical University of the Ministry of Health of the Russian Federation

Email: noemail@neicon.ru
ORCID iD: 0000-0003-3510-2595
Russian Federation

Lyaylya M. Masyagutova

Ufa Scientific Research Institute of Occupational Medicine and Human Ecology; Bashkir State Medical University of the Ministry of Health of the Russian Federation

Email: noemail@neicon.ru
ORCID iD: 0000-0003-0195-8862
Russian Federation

Rimma H. Kudakaeva

Ufa Scientific Research Institute of Occupational Medicine and Human Ecology

Email: noemail@neicon.ru
ORCID iD: 0000-0002-1704-8495
Russian Federation

Alina R. Muzafarova

Ufa Scientific Research Institute of Occupational Medicine and Human Ecology

Email: noemail@neicon.ru
ORCID iD: 0000-0002-4218-6304
Russian Federation

References

  1. Munita J.M., Arias C.A. Mechanisms of antibiotic resistance. Microbiol. Spectr. 2016; 4(2). https://doi.org/10.1128/microbiolspec.vmbf-0016-2015
  2. Huemer M., Mairpady Shambat S., Brugger S.D., Zinkernagel A.S. Antibiotic resistance and persistence-Implications for human health and treatment perspectives. EMBO Rep. 2020; 21(12): e51034. https://doi.org/10.15252/embr.202051034
  3. Davies J., Davies D. Origins and evolution of antibiotic resistance. Microbiol. Mol. Biol. Rev. 2010; 74(3): 417–33. https://doi.org/10.1128/mmbr.00016-10
  4. Martinez J.L. General principles of antibiotic resistance in bacteria. Drug Discov. Today Technol. 2014; 11: 33–9. https://doi.org/10.1016/j.ddtec.2014.02.001
  5. Hall C.W., Mah T.F. Molecular mechanisms of biofilm-based antibiotic resistance and tolerance in pathogenic bacteria. FEMS Microbiol Rev. 2017; 41(3): 276–301. https://doi.org/10.1093/femsre/fux010
  6. Wencewicz T.A. Crossroads of antibiotic resistance and biosynthesis. J. Mol. Biol. 2019; 431(18): 3370–99. https://doi.org/10.1016/j.jmb.2019.06.033
  7. Ogawara H. Comparison of antibiotic resistance mechanisms in antibiotic-producing and pathogenic bacteria. Molecules. 2019; 24(19): 3430. https://doi.org/10.3390/molecules24193430
  8. Lerminiaux N.A., Cameron A.D.S. Horizontal transfer of antibiotic resistance genes in clinical environments. Can. J. Microbiol. 2019; 65(1): 34–44. https://doi.org/10.1139/cjm-2018-0275
  9. Sidorenko S.V. Trends in the Spread of antibiotic resistance among pathogens of community-acquired infections in the Territory of the Russian Federation. Consilium Medicum. 2007; 9(1): 75–9. https://elibrary.ru/rckgwh (in Russian)
  10. Shaydullina E.R., Eydel’shteyn M.V., Skleenova E.Yu., Sukhorukova M.V., Kozlov R.S. Antimicrobal resistance of nosocomial carbapenemase-producing Enterobacterales in Russia: results of surveillance, 2014–2016. Klinicheskaya mikrobiologiya i antimikrobnaya khimioterapiya. 2018; 20(4): 362–9. https://elibrary.ru/zaghhn (in Russian)
  11. Ustyuzhanin A.V., Chistyakova G.N., Remizova I.I., Makhanek A.A. Prevalence of antibiotic resistance genes bla-CTX-M, bla-SHV, bla-TEM in enterobacteria strains isolated from perinatal center patients. Epidemiologiya i vaktsinoprofilaktika. 2022; 21(3): 44–9. https://doi.org/10.31631/2073-3046-2022-21-3-44-49 https://elibrary.ru/hlwyoc (in Russian)
  12. Khaertynov Kh.S., Anokhin V.A., Rizvanov A.A., Davidyuk Yu.N., Khaliullina S.V., Lyubin S.A., et al. Virulence and antibiotic resistance of isolates of Klebsiella pneumoniae in newborns with localized and generalized forms of infection. Rossiyskiy vestnik perinatologii i pediatrii. 2018; 63(5): 139–46. https://doi.org/10.21508/1027-4065-2018-63-5-139-146 https://elibrary.ru/sjpyed (in Russian)
  13. Khamari B., Kumar P., Pradeep B.E. Resistance to nitrofurantoin is an indicator of extensive drug-resistant (XDR) Enterobacteriaceae. J. Med. Microbiol. 2021; 70(4). https://doi.org/10.1099/jmm.0.001347
  14. Gervasoni S., Spencer J., Hinchliffe P., Pedretti A., Vairoletti F., Mahler G., et al. A multiscale approach to predict the binding mode of metallo beta-lactamase inhibitors. Proteins. 2022; 90(2): 372–84. https://doi.org/10.1002/prot.26227
  15. Lazareva I.V., Ageevets V.A., Sidorenko S.V. Antibiotic resistance: the role of carbapenemases. Meditsina ekstremal’nykh situatsiy. 2018; 20(3): 320–28. https://elibrary.ru/vbfunl (in Russian)
  16. Kuz’menkov A.Yu., Vinogradova A.G., Trushin I.V., Eydel’shteyn M.V., Avramenko A.A., Dekhnich A.V., et al. AMRmap – antibiotic resistance surveillance system in Russia. Klinicheskaya mikrobiologiya i antimikrobnaya khimioterapiya. 2021; 23(2): 198–204. https://doi.org/10.36488/cmac.2021.2.198-204 https://elibrary.ru/mcleon (in Russian)
  17. Bonda N.A., Stoma I.O., Osipkina O.V., Zyat‘kov A.A., Shaforost A.S., Karpova E.V., et al. Molecular genetic markers of resistance and virulence of invasive Klebsiella pneumoniae strains according to whole genome sequencing data. Problemy zdorov’ya i ekologii. 2023; 20(1): 7–15. https://doi.org/10.51523/2708-6011.2023-20-1-01 https://elibrary.ru/ybrfyp (in Russian)
  18. Tapal’skiy D.V., Karpova E.V., Akulenok O.M., Okulich V.K., Generalov I.I., Leskova N.Yu., et al. Antibiotic resistance of Klebsiella pneumoniae against the background of the COVID-19 pandemic: experience of the multidisciplinary hospital. Infektsionnye bolezni: novosti, mneniya, obuchenie. 2021; 10(3): 15–22. https://doi.org/10.33029/2305-3496-2021-10-3-15-22 https://elibrary.ru/hbehay (in Russian)

Supplementary files

Supplementary Files
Action
1. JATS XML

Copyright (c) 2024 Gizatullina L.G., Bakirov A.B., Masyagutova L.M., Kudakaeva R.H., Muzafarova A.R.



СМИ зарегистрировано Федеральной службой по надзору в сфере связи, информационных технологий и массовых коммуникаций (Роскомнадзор).
Регистрационный номер и дата принятия решения о регистрации СМИ: серия ПИ № ФС 77 - 37884 от 02.10.2009.